Targeted sequencing of Cucurbita cordata - SRA

SRX22458136: Targeted sequencing of Cucurbita cordata
1 ILLUMINA (Illumina HiSeq 3000) run: 3.1M spots, 928.9M bases, 283.2Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 10

PRJNA1022032 • SRP471028 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Cucurbita cordata

SAMN37585212 • SRS19472140 • All experiments • All runs

Organism: Cucurbita cordata

Library:

Name: 4720c690-3f17-4e96-b8b1-f9c57852c286

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 3.1M spots, 928.9M bases, 283.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR26759201	3,096,450	928.9M	283.2Mb	2023-11-09

ID:: 30443925

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